Escherichia coli strain 389639 SAMN09371778-rid9461513.guided.161

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 389639 (SAMN09371778-rid9461513.guided.161) is a Gram-negative, rod-shaped bacterium that typically exists in pairs or singles. This strain thrives optimally at 37°C, which corresponds to the average body temperature of warm-blooded hosts, suggesting a close association with host environments. As a facultative anaerobe, E. coli strain 389639 is capable of growth in both aerobic and anaerobic conditions, allowing it to adapt to varying oxygen levels within its host-associated habitats. The ability of this strain to inhabit host environments underscores its potential role in the microbiota of various organisms, where it may contribute to metabolic processes or nutrient cycling. Furthermore, the adaptability afforded by its facultative anaerobic metabolism enables it to exploit diverse ecological niches within its host, potentially influencing the microbial community structure. Understanding the specific interactions and functions of E. coli strain 389639 within its host could provide valuable insights into its ecological significance in host-associated microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 389639 SAMN09371778-rid9461513.guided.161
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain 389639 SAMN09371778-rid9461513.guided.161

Accession NumberRTHS00000000.2

Gene Summary

Adenine Count

1323848 bp

Thymine Count

1307626 bp

Guanine Count

1316056 bp

Cytosine Count

1339205 bp

Genome Length

5306567 bp

Protein-coding Genes

4922 genes

Non-Coding Genes

195 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Primase/helicaseE9D03_RS19360Not Available+4177106 - 417850652038.0
hypothetical proteinE9D03_RS19365Not Available+4178707 - 41789589491.28
Putative ssdna binding proteinE9D03_RS19370Not Available+4178955 - 417936514308.8
Transcriptional regulatorE9D03_RS19375Not Available+4179376 - 417964810521.3
hypothetical proteinE9D03_RS19380Not Available+4179775 - 41799998635.39
hypothetical proteinE9D03_RS19385Not Available+4180251 - 41804577359.94
Bacteriophage major capsid proteinE9D03_RS19390Not Available+4180457 - 418151239510.3
Bacteriophage head decoration proteinE9D03_RS19395Not Available+4181525 - 418186011927.0
phage head-tail connector proteinE9D03_RS19400Not Available+4181873 - 418228615134.2
Gp1E9D03_RS19405Not Available+4182492 - 418303420255.4

Displaying genes 71 – 80 of 5152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites