Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter mdfa | E9D03_RS03010 | Not Available | Negative | 677173 - 678405 | 44323.7 |
| undecaprenyl-diphosphate phosphatase | E9D03_RS03015 | Not Available | Positive | 678690 - 679286 | 22385.9 |
| dna-binding transcriptional repressor deor | E9D03_RS03020 | Not Available | Positive | 679344 - 680102 | 28549.5 |
| serine-type d-ala-d-ala carboxypeptidase | E9D03_RS03025 | Not Available | Negative | 680149 - 681351 | 43643.4 |
| glutathione s-transferase family protein | E9D03_RS03030 | Not Available | Positive | 681597 - 682223 | 23714.4 |
| pqq-dependent sugar dehydrogenase | E9D03_RS03035 | Not Available | Negative | 682220 - 683335 | 41116.9 |
| biofilm formation regulator bssr | E9D03_RS03040 | Not Available | Negative | 683446 - 683829 | 14536.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | E9D03_RS03045 | Not Available | Positive | 684042 - 685367 | 49584.6 |
| type ii toxin-antitoxin system rele/pare family toxin | E9D03_RS03050 | Not Available | Positive | 685593 - 685979 | 14280.2 |
| dna-binding transcriptional regulator | E9D03_RS03055 | Not Available | Positive | 685969 - 686298 | 11982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




