Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6--l-glutamate ligase | E9D03_RS02960 | Not Available | Negative | 669209 - 670111 | 32438.5 |
| nitroreductase nfsa | E9D03_RS02965 | Not Available | Negative | 670172 - 670894 | 26852.1 |
| ybjc family protein | E9D03_RS02970 | Not Available | Negative | 670878 - 671165 | 10551.4 |
| glutaredoxin 1 | E9D03_RS02975 | Not Available | Positive | 671325 - 671582 | 9695.39 |
| hypothetical protein | E9D03_RS02980 | Not Available | Negative | 671612 - 671989 | 14204.0 |
| aspartate:alanine antiporter | E9D03_RS02985 | Not Available | Positive | 672259 - 673944 | 60355.1 |
| tetr/acrr family transcriptional regulator | E9D03_RS02990 | Not Available | Negative | 674119 - 674655 | 20339.6 |
| mfs transporter | E9D03_RS02995 | Not Available | Positive | 674739 - 675947 | 41841.0 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | E9D03_RS03000 | Not Available | Positive | 675947 - 676762 | 30325.1 |
| hypothetical protein | E9D03_RS03005 | Not Available | Positive | 676848 - 677132 | 9952.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




