Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (d)cmp kinase | E9D03_RS02655 | Not Available | Negative | 595845 - 596528 | 24747.8 |
| m48 family metallopeptidase | E9D03_RS02660 | Not Available | Negative | 596701 - 597465 | 26796.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | E9D03_RS02665 | Not Available | Negative | 597634 - 598917 | 46098.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | E9D03_RS02670 | Not Available | Negative | 598988 - 600076 | 39856.6 |
| duf421 domain-containing protein | E9D03_RS02675 | Not Available | Negative | 600275 - 600967 | 26273.5 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | E9D03_RS02680 | Not Available | Positive | 601097 - 602857 | 65669.0 |
| formate transporter foca | E9D03_RS02685 | Not Available | Positive | 603263 - 604120 | 30992.6 |
| formate c-acetyltransferase | E9D03_RS02690 | Not Available | Positive | 604175 - 606457 | 85355.0 |
| pyruvate formate lyase 1-activating protein | E9D03_RS02695 | Not Available | Positive | 606649 - 607389 | 28205.9 |
| amino acid permease | E9D03_RS02705 | Not Available | Negative | 607599 - 609029 | 52472.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




