Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope biogenesis factor elyc | E9D03_RS02605 | Not Available | Positive | 584329 - 585108 | 28668.0 |
| ycbj family phosphotransferase | E9D03_RS02610 | Not Available | Negative | 585085 - 585978 | 34549.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | E9D03_RS02615 | Not Available | Negative | 586132 - 586878 | 27611.1 |
| protein ycar | E9D03_RS02620 | Not Available | Negative | 586875 - 587057 | 6855.35 |
| winged helix-turn-helix domain-containing protein | E9D03_RS02625 | Not Available | Negative | 587109 - 588341 | 47717.6 |
| tetraacyldisaccharide 4'-kinase | E9D03_RS02630 | Not Available | Negative | 588378 - 589364 | 35565.3 |
| lipid a abc transporter atp-binding protein/permease msba | E9D03_RS02635 | Not Available | Negative | 589361 - 591109 | 64464.6 |
| comec family protein | E9D03_RS02640 | Not Available | Negative | 591146 - 593410 | 84448.9 |
| integration host factor subunit beta | E9D03_RS02645 | Not Available | Negative | 593617 - 593901 | 10651.8 |
| 30s ribosomal protein s1 | E9D03_RS02650 | Not Available | Negative | 594061 - 595734 | 61161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




