Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | E9D03_RS02555 | Not Available | Positive | 568916 - 570316 | 52617.3 |
| porin ompf | E9D03_RS02560 | Not Available | Positive | 570919 - 572007 | 39363.5 |
| aspartate/tyrosine/aromatic aminotransferase | E9D03_RS02565 | Not Available | Positive | 572192 - 573382 | 43647.8 |
| hydroxyacylglutathione hydrolase gloc | E9D03_RS02570 | Not Available | Negative | 573433 - 574080 | 23729.3 |
| ycbk family protein | E9D03_RS02575 | Not Available | Negative | 574107 - 574655 | 20355.6 |
| l,d-transpeptidase | E9D03_RS02580 | Not Available | Negative | 574836 - 576683 | 67856.3 |
| chromosome partition protein mukb | E9D03_RS02585 | Not Available | Negative | 576944 - 581404 | 170211.0 |
| chromosome partition protein muke | E9D03_RS02590 | Not Available | Negative | 581404 - 582108 | 26990.1 |
| chromosome partition protein mukf | E9D03_RS02595 | Not Available | Negative | 582089 - 583411 | 50535.7 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | E9D03_RS02600 | Not Available | Negative | 583408 - 584193 | 29846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




