Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4224 domain-containing protein | E9D03_RS02345 | Not Available | Positive | 524836 - 525078 | 9216.22 |
| tyrosine-type recombinase/integrase | E9D03_RS02350 | Not Available | Positive | 525056 - 526075 | 38872.1 |
| ftsh protease modulator ycca | E9D03_RS02355 | Not Available | Positive | 526483 - 527142 | 23394.4 |
| sulfurtransferase tuse | E9D03_RS02360 | Not Available | Positive | 527233 - 527562 | 12411.0 |
| acylphosphatase | E9D03_RS02365 | Not Available | Negative | 527559 - 527837 | 10300.3 |
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | E9D03_RS02370 | Not Available | Positive | 527932 - 529122 | 44359.5 |
| heat shock protein hspq | E9D03_RS02375 | Not Available | Positive | 529180 - 529497 | 11779.9 |
| coa-binding protein | E9D03_RS02380 | Not Available | Negative | 529542 - 529955 | 14702.0 |
| duf2057 family protein | E9D03_RS02385 | Not Available | Positive | 530128 - 530790 | 24595.5 |
| methylglyoxal synthase | E9D03_RS02390 | Not Available | Positive | 530886 - 531344 | 16919.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




