Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator arca | E9D03_RS02185 | Not Available | Positive | 492126 - 492842 | 27293.6 |
| cell envelope integrity protein cred | E9D03_RS02190 | Not Available | Negative | 492902 - 494254 | 49951.8 |
| two-component system sensor histidine kinase crec | E9D03_RS02195 | Not Available | Negative | 494312 - 495736 | 52231.4 |
| two-component system response regulator creb | E9D03_RS02200 | Not Available | Negative | 495736 - 496425 | 26212.9 |
| protein crea | E9D03_RS02205 | Not Available | Negative | 496438 - 496911 | 17108.8 |
| mdr efflux pump acrab transcriptional activator roba | E9D03_RS02210 | Not Available | Positive | 497122 - 497991 | 33146.8 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase gpmb | E9D03_RS02215 | Not Available | Negative | 497988 - 498635 | 24066.7 |
| non-canonical purine ntp phosphatase | E9D03_RS02220 | Not Available | Positive | 498687 - 499199 | 18271.8 |
| trp operon repressor | E9D03_RS02225 | Not Available | Negative | 499346 - 499672 | 12355.9 |
| murein transglycosylase | E9D03_RS02230 | Not Available | Negative | 499762 - 501699 | 73357.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




