Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | E9D03_RS02135 | Not Available | Negative | 481572 - 482525 | 35221.2 |
| sodium:alanine symporter family protein | E9D03_RS02140 | Not Available | Positive | 482804 - 484234 | 51689.0 |
| peroxide stress protein yaaa | E9D03_RS02145 | Not Available | Positive | 484304 - 485080 | 29601.5 |
| duf2502 domain-containing protein | E9D03_RS02150 | Not Available | Negative | 485233 - 485529 | 11409.6 |
| threonine synthase | E9D03_RS02155 | Not Available | Negative | 485743 - 487029 | 47086.4 |
| homoserine kinase | E9D03_RS02160 | Not Available | Negative | 487030 - 487962 | 33627.6 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | E9D03_RS02165 | Not Available | Negative | 487964 - 490426 | 89084.5 |
| thr operon leader peptide | E9D03_RS02170 | Not Available | Negative | 490507 - 490590 | 2769.39 |
| trna/rrna methyltransferase | E9D03_RS02175 | Not Available | Negative | 490804 - 491490 | 25316.6 |
| hypothetical protein | E9D03_RS02180 | Not Available | Negative | 491890 - 492030 | 4886.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




