Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | E9D03_RS02080 | Not Available | Positive | 469031 - 471481 | 92050.7 |
| transcriptional activator nhar | E9D03_RS02090 | Not Available | Negative | 472492 - 473391 | 34096.1 |
| na+/h+ antiporter nhaa | E9D03_RS02095 | Not Available | Negative | 473457 - 474623 | 41376.3 |
| type i toxin-antitoxin system toxin mokc | E9D03_RS02100 | Not Available | Positive | 475152 - 475361 | 7770.8 |
| molecular chaperone dnaj | E9D03_RS02105 | Not Available | Negative | 475465 - 476595 | 41046.7 |
| molecular chaperone dnak | E9D03_RS02110 | Not Available | Negative | 476684 - 478600 | 69118.9 |
| duf2541 family protein | E9D03_RS02115 | Not Available | Positive | 478977 - 479381 | 14466.4 |
| acidic protein msyb | E9D03_RS02120 | Not Available | Positive | 479407 - 480120 | 26682.5 |
| acetate uptake transporter | E9D03_RS02125 | Not Available | Positive | 480269 - 480835 | 20072.2 |
| molybdopterin adenylyltransferase | E9D03_RS02130 | Not Available | Negative | 480870 - 481457 | 21223.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




