Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate binding subunit | E9D03_RS01825 | Not Available | Positive | 410485 - 411468 | 36177.3 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | E9D03_RS01830 | Not Available | Positive | 411444 - 413054 | 59398.5 |
| thiamine abc transporter atp-binding protein thiq | E9D03_RS01835 | Not Available | Positive | 413038 - 413736 | 25026.7 |
| deda family protein | E9D03_RS01840 | Not Available | Negative | 413823 - 414587 | 28199.7 |
| arabinose operon transcriptional regulator arac | E9D03_RS01845 | Not Available | Negative | 414673 - 415551 | 33413.8 |
| ribulokinase | E9D03_RS01850 | Not Available | Positive | 415890 - 417590 | 61230.8 |
| l-arabinose isomerase | E9D03_RS01855 | Not Available | Positive | 417601 - 419103 | 56092.2 |
| l-ribulose-5-phosphate 4-epimerase | E9D03_RS01860 | Not Available | Positive | 419303 - 419998 | 25504.3 |
| dna polymerase ii | E9D03_RS01865 | Not Available | Positive | 420073 - 422424 | 90145.8 |
| rna polymerase-associated protein rapa | E9D03_RS01870 | Not Available | Positive | 422588 - 425494 | 109775.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




