Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 large subunit | E9D03_RS01775 | Not Available | Negative | 398825 - 400549 | 62847.0 |
| transcriptional regulator leuo | E9D03_RS01780 | Not Available | Negative | 400867 - 401811 | 35715.8 |
| leu operon leader peptide | E9D03_RS01785 | Not Available | Positive | 402469 - 402555 | 3146.0 |
| 2-isopropylmalate synthase | E9D03_RS01790 | Not Available | Positive | 402648 - 404219 | 57317.2 |
| 3-isopropylmalate dehydrogenase | E9D03_RS01795 | Not Available | Positive | 404219 - 405310 | 39517.2 |
| 3-isopropylmalate dehydratase large subunit | E9D03_RS01800 | Not Available | Positive | 405313 - 406713 | 49900.8 |
| 3-isopropylmalate dehydratase small subunit | E9D03_RS01805 | Not Available | Positive | 406724 - 407329 | 22520.7 |
| glucose uptake inhibitor sgrt | E9D03_RS01810 | Not Available | Negative | 407437 - 407568 | 5382.47 |
| hth-type transcriptional regulator sgrr | E9D03_RS01815 | Not Available | Positive | 407657 - 409315 | 64123.8 |
| t3ss effector espy2 | E9D03_RS01820 | Not Available | Negative | 409544 - 410113 | 21439.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




