Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate ammonia-lyase | E9D03_RS26260 | Not Available | Positive | 5257735 - 5259171 | 52359.2 |
| anaerobic c4-dicarboxylate transporter | E9D03_RS26265 | Not Available | Positive | 5259289 - 5260590 | 45753.5 |
| divalent cation tolerance protein cuta | E9D03_RS26270 | Not Available | Positive | 5260706 - 5261044 | 12331.7 |
| protein-disulfide reductase dsbd | E9D03_RS26275 | Not Available | Positive | 5261020 - 5262717 | 61842.8 |
| transcriptional regulator | E9D03_RS26280 | Not Available | Positive | 5262754 - 5263329 | 21932.3 |
| urease accessory protein ureg | E9D03_RS26285 | Not Available | Negative | 5263458 - 5263938 | 17033.4 |
| urease accessory protein uref | E9D03_RS26290 | Not Available | Negative | 5263950 - 5264624 | 25156.9 |
| urease accessory protein uree | E9D03_RS26295 | Not Available | Negative | 5264625 - 5265089 | 17307.7 |
| urease subunit alpha | E9D03_RS26300 | Not Available | Negative | 5265099 - 5266802 | 60498.2 |
| urease subunit beta | E9D03_RS26305 | Not Available | Negative | 5266795 - 5267115 | 11762.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




