Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| miniconductance mechanosensitive channel mscm | E9D03_RS26160 | Not Available | Positive | 5237418 - 5240741 | 123976.0 |
| glutamate/gamma-aminobutyrate family transporter yjem | E9D03_RS26165 | Not Available | Negative | 5240892 - 5242394 | 54693.2 |
| elongation factor p--(r)-beta-lysine ligase | E9D03_RS26170 | Not Available | Negative | 5242613 - 5243590 | 36978.1 |
| fumarate reductase (quinol) flavoprotein subunit | E9D03_RS26175 | Not Available | Positive | 5243915 - 5245723 | 65974.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | E9D03_RS26180 | Not Available | Positive | 5245716 - 5246450 | 27124.5 |
| fumarate reductase subunit frdc | E9D03_RS26185 | Not Available | Positive | 5246461 - 5246856 | 15015.8 |
| fumarate reductase subunit frdd | E9D03_RS26190 | Not Available | Positive | 5246867 - 5247226 | 13107.8 |
| blaec family class c beta-lactamase | E9D03_RS26195 | Not Available | Positive | 5247289 - 5248422 | 41533.8 |
| lipocalin family protein | E9D03_RS26200 | Not Available | Positive | 5248510 - 5249043 | 19852.7 |
| quaternary ammonium compound-resistance protein suge | E9D03_RS26205 | Not Available | Negative | 5249040 - 5249357 | 10901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




