Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylating nicotinate-nucleotide diphosphorylase | E9D03_RS01625 | Not Available | Positive | 367650 - 368543 | 32774.0 |
| prepilin peptidase-dependent pilin | E9D03_RS01630 | Not Available | Positive | 368746 - 369186 | 15534.6 |
| type ii secretion system protein gspe | E9D03_RS01635 | Not Available | Positive | 369196 - 370581 | 50565.5 |
| protein transport protein hofc | E9D03_RS01640 | Not Available | Positive | 370571 - 371773 | 44402.2 |
| gmp reductase | E9D03_RS01645 | Not Available | Negative | 371808 - 372851 | 37399.9 |
| dephospho-coa kinase | E9D03_RS01650 | Not Available | Positive | 373076 - 373696 | 22623.0 |
| cell division protein zapd | E9D03_RS01655 | Not Available | Positive | 373696 - 374439 | 28309.4 |
| dna gyrase inhibitor yacg | E9D03_RS01660 | Not Available | Positive | 374449 - 374646 | 7306.49 |
| 8-oxo-dgtp diphosphatase mutt | E9D03_RS01665 | Not Available | Negative | 374737 - 375135 | 15163.2 |
| preprotein translocase subunit seca | E9D03_RS01670 | Not Available | Negative | 375195 - 377900 | 101971.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




