Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| perc family transcriptional regulator | E9D03_RS26010 | Not Available | Negative | 5225690 - 5225861 | 6674.22 |
| transposase | E9D03_RS26015 | Not Available | Positive | 5226195 - 5226697 | 18598.3 |
| phage tail protein | E9D03_RS26020 | Not Available | Negative | 5226698 - 5227080 | 14453.8 |
| phage tail protein | E9D03_RS26025 | Not Available | Negative | 5227077 - 5227188 | 4320.33 |
| is256 family transposase | E9D03_RS26030 | Not Available | Positive | 5227279 - 5227671 | 14660.3 |
| tyrosine-type recombinase/integrase | E9D03_RS26035 | Not Available | Positive | 5227672 - 5228153 | 18052.9 |
| host specificity protein j | E9D03_RS26040 | Not Available | Positive | 5228415 - 5228629 | 7292.83 |
| nine family protein | E9D03_RS26045 | Not Available | Positive | 5228637 - 5228819 | 7507.16 |
| protein ninf | E9D03_RS26050 | Not Available | Positive | 5228816 - 5228986 | 6341.31 |
| recombination protein ning | E9D03_RS26055 | Not Available | Positive | 5228976 - 5229103 | 5111.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




