Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | E9D03_RS25955 | Not Available | Positive | 5221420 - 5221960 | 20717.8 |
| phage tail protein | E9D03_RS25960 | Not Available | Negative | 5221961 - 5222296 | 12030.2 |
| duf2612 domain-containing protein | E9D03_RS25965 | Not Available | Negative | 5222296 - 5222542 | 8748.19 |
| duf1737 domain-containing protein | E9D03_RS25970 | Not Available | Negative | 5222543 - 5222746 | 7233.62 |
| anti-adapter protein iram | E9D03_RS25975 | Not Available | Positive | 5222990 - 5223084 | 3612.54 |
| hypothetical protein | E9D03_RS25980 | Not Available | Positive | 5223085 - 5223234 | 5273.46 |
| ail/lom family outer membrane beta-barrel protein | E9D03_RS25985 | Not Available | Positive | 5223302 - 5223615 | 11602.5 |
| outer membrane protein assembly factor bame | E9D03_RS25995 | Not Available | Negative | 5224316 - 5224618 | 10822.7 |
| phage tail tape measure protein | E9D03_RS26000 | Not Available | Negative | 5224667 - 5225183 | 17633.9 |
| phage terminase large subunit family protein | E9D03_RS26005 | Not Available | Negative | 5225184 - 5225689 | 18924.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




