Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1627 domain-containing protein | E9D03_RS25905 | Not Available | Positive | 5217084 - 5217622 | 19174.8 |
| duf1983 domain-containing protein | E9D03_RS25910 | Not Available | Positive | 5217623 - 5218268 | 23858.2 |
| helix-turn-helix domain-containing protein | E9D03_RS25915 | Not Available | Negative | 5218269 - 5218655 | 14622.8 |
| duf1076 domain-containing protein | E9D03_RS25920 | Not Available | Negative | 5218899 - 5219364 | 16487.6 |
| phage tail protein | E9D03_RS25925 | Not Available | Positive | 5219522 - 5219979 | 15098.4 |
| phage tail protein | E9D03_RS25930 | Not Available | Positive | 5219981 - 5220141 | 5969.18 |
| rhs repeat protein | E9D03_RS25935 | Not Available | Positive | 5220142 - 5220750 | 23607.9 |
| lysozyme | E9D03_RS25940 | Not Available | Positive | 5220751 - 5220870 | 4641.43 |
| lysis protein | E9D03_RS25945 | Not Available | Positive | 5221169 - 5221356 | 7060.58 |
| recombination protein ning | E9D03_RS25950 | Not Available | Positive | 5221357 - 5221423 | 2460.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




