Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage recombination protein bet | E9D03_RS25785 | Not Available | Positive | 5207637 - 5208161 | 20316.0 |
| yqaj viral recombinase family protein | E9D03_RS25790 | Not Available | Positive | 5208158 - 5208420 | 9803.8 |
| tail assembly protein | E9D03_RS25795 | Not Available | Positive | 5208421 - 5208567 | 5002.98 |
| host specificity protein j | E9D03_RS25800 | Not Available | Positive | 5208910 - 5209202 | 10009.8 |
| ead/ea22-like family protein | E9D03_RS25810 | Not Available | Positive | 5209959 - 5210574 | 23825.0 |
| hypothetical protein | E9D03_RS25815 | Not Available | Positive | 5210576 - 5210709 | 5079.2 |
| t3ss effector nleg | E9D03_RS25820 | Not Available | Negative | 5210710 - 5210820 | 4129.94 |
| duf1076 domain-containing protein | E9D03_RS25825 | Not Available | Negative | 5210902 - 5211435 | 19924.8 |
| portal protein | E9D03_RS25830 | Not Available | Positive | 5211436 - 5211888 | 16343.1 |
| phage gp6-like head-tail connector protein | E9D03_RS25835 | Not Available | Positive | 5211891 - 5212159 | 10009.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




