Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage antirepressor ant | E9D03_RS25625 | Not Available | Positive | 5191857 - 5192384 | 20362.3 |
| duf1737 domain-containing protein | E9D03_RS25630 | Not Available | Negative | 5192385 - 5192962 | 20530.3 |
| trmb family transcriptional regulator | E9D03_RS25635 | Not Available | Negative | 5193434 - 5193498 | 2440.96 |
| duf1133 family protein | E9D03_RS25640 | Not Available | Negative | 5193723 - 5194277 | 21197.2 |
| rusa family crossover junction endodeoxyribonuclease | E9D03_RS25645 | Not Available | Negative | 5194340 - 5194481 | 5222.29 |
| duf1737 domain-containing protein | E9D03_RS25650 | Not Available | Positive | 5194879 - 5195468 | 20917.9 |
| invasion protein | E9D03_RS25660 | Not Available | Negative | 5196477 - 5196743 | 10142.1 |
| transcriptional regulator | E9D03_RS25665 | Not Available | Negative | 5196773 - 5197273 | 19159.0 |
| hypothetical protein | E9D03_RS25670 | Not Available | Negative | 5197666 - 5197854 | 7482.25 |
| phage tail protein | E9D03_RS25675 | Not Available | Negative | 5197994 - 5198263 | 9860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




