Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yacl family protein | E9D03_RS01575 | Not Available | Negative | 351662 - 352024 | 13942.3 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | E9D03_RS01580 | Not Available | Negative | 352200 - 354797 | 93489.4 |
| duf3300 domain-containing protein | E9D03_RS01585 | Not Available | Positive | 355152 - 357005 | 69248.5 |
| dihydrolipoyl dehydrogenase | E9D03_RS01590 | Not Available | Negative | 357076 - 358500 | 50691.4 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | E9D03_RS01595 | Not Available | Negative | 358708 - 360600 | 66187.8 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | E9D03_RS01600 | Not Available | Negative | 360615 - 363278 | 99674.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | E9D03_RS01605 | Not Available | Negative | 363439 - 364203 | 29427.2 |
| aromatic amino acid transporter arop | E9D03_RS01610 | Not Available | Positive | 364744 - 366117 | 49666.0 |
| beta-lactamase regulator ampe | E9D03_RS01615 | Not Available | Negative | 366160 - 367014 | 32142.9 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | E9D03_RS01620 | Not Available | Negative | 367011 - 367562 | 20495.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




