Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding transcriptional regulator | E9D03_RS25470 | Not Available | Positive | 5177873 - 5178265 | 14860.9 |
| transposase | E9D03_RS25475 | Not Available | Negative | 5178305 - 5178595 | 10486.6 |
| Trna-arg | Not Available | Not Available | Positive | 5178736 - 5178812 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5178826 - 5178902 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5178904 - 5178979 | Not Available |
| antiterminator | E9D03_RS25495 | Not Available | Negative | 5179293 - 5179781 | 18627.8 |
| phage terminase large subunit family protein | E9D03_RS25500 | Not Available | Positive | 5179881 - 5180693 | 30677.2 |
| phage tail protein | E9D03_RS25505 | Not Available | Positive | 5180690 - 5180896 | 7643.22 |
| portal protein | E9D03_RS25510 | Not Available | Positive | 5180893 - 5181096 | 7135.39 |
| secretion protein esps | E9D03_RS25515 | Not Available | Negative | 5181243 - 5182118 | 32180.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




