Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 5133891 - 5133966 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5134047 - 5134123 | Not Available |
| duf945 domain-containing protein | E9D03_RS25060 | Not Available | Negative | 5134636 - 5135164 | 20273.3 |
| hypothetical protein | E9D03_RS25065 | Not Available | Negative | 5135385 - 5135795 | 15055.2 |
| hypothetical protein | E9D03_RS25070 | Not Available | Negative | 5135811 - 5136494 | 25239.3 |
| duf1391 domain-containing protein | E9D03_RS25075 | Not Available | Negative | 5136980 - 5137132 | 5590.59 |
| lexa family transcriptional regulator | E9D03_RS25080 | Not Available | Negative | 5137407 - 5138051 | 23173.1 |
| cell division protein | E9D03_RS25085 | Not Available | Positive | 5138149 - 5138376 | 8442.09 |
| rha family transcriptional regulator | E9D03_RS25090 | Not Available | Positive | 5138373 - 5138501 | 5040.13 |
| helix-turn-helix domain-containing protein | E9D03_RS25095 | Not Available | Positive | 5138502 - 5139170 | 25049.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




