Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rha family transcriptional regulator | E9D03_RS24850 | Not Available | Positive | 5109581 - 5109855 | 10117.3 |
| hypothetical protein | E9D03_RS24855 | Not Available | Negative | 5110062 - 5110517 | 17485.9 |
| dna-binding protein | E9D03_RS24860 | Not Available | Positive | 5110596 - 5111687 | 40527.2 |
| dna replication protein dnac | E9D03_RS24865 | Not Available | Positive | 5111694 - 5111893 | 7888.53 |
| phage tail tape measure protein | E9D03_RS24870 | Not Available | Negative | 5111894 - 5112342 | 16206.9 |
| duf4035 domain-containing protein | E9D03_RS24875 | Not Available | Negative | 5112390 - 5112599 | 7584.96 |
| phage tail protein | E9D03_RS24880 | Not Available | Negative | 5112695 - 5113069 | 14036.8 |
| phage tail protein | E9D03_RS24885 | Not Available | Negative | 5113084 - 5113800 | 25393.8 |
| duf3168 domain-containing protein | E9D03_RS24890 | Not Available | Negative | 5113866 - 5114087 | 7939.37 |
| exopolyphosphatase | E9D03_RS24895 | Not Available | Negative | 5114088 - 5114536 | 16083.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




