Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | E9D03_RS24745 | Not Available | Positive | 5096997 - 5097760 | 26302.7 |
| is66 family insertion sequence hypothetical protein | E9D03_RS24750 | Not Available | Positive | 5097820 - 5098200 | 14071.0 |
| is66 family insertion sequence element accessory protein tnpb | E9D03_RS24755 | Not Available | Positive | 5098197 - 5098544 | 12771.9 |
| is66-like element isec8 family transposase | E9D03_RS24760 | Not Available | Positive | 5098594 - 5100132 | 57746.1 |
| antitermination protein | E9D03_RS24765 | Not Available | Negative | 5100260 - 5100949 | 26180.2 |
| ylcg family protein | E9D03_RS24770 | Not Available | Negative | 5100964 - 5101086 | 4833.04 |
| lipid a deacylase lpxr family protein | E9D03_RS24775 | Not Available | Positive | 5101423 - 5102382 | 34935.9 |
| rha family transcriptional regulator | E9D03_RS24780 | Not Available | Negative | 5102536 - 5102688 | 5923.07 |
| transcriptional regulator | E9D03_RS24785 | Not Available | Negative | 5102672 - 5102995 | 12197.6 |
| hypothetical protein | E9D03_RS24790 | Not Available | Positive | 5103120 - 5103596 | 17626.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




