Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | E9D03_RS24585 | Not Available | Negative | 5076887 - 5077012 | 3959.72 |
| cell division inhibition protein dicb | E9D03_RS24590 | Not Available | Positive | 5077013 - 5077193 | 6685.13 |
| duf1482 family protein | E9D03_RS24595 | Not Available | Positive | 5077190 - 5077381 | 6722.09 |
| exonuclease | E9D03_RS24600 | Not Available | Positive | 5077475 - 5079858 | 89126.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | E9D03_RS24605 | Not Available | Negative | 5079859 - 5080108 | 9520.83 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | E9D03_RS24615 | Not Available | Negative | 5080886 - 5081146 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | E9D03_RS24620 | Not Available | Negative | 5081157 - 5081822 | 24575.5 |
| yscq/hrcq family type iii secretion apparatus protein | E9D03_RS24625 | Not Available | Negative | 5081812 - 5082603 | 30239.4 |
| nyn domain-containing protein | E9D03_RS24630 | Not Available | Negative | 5082604 - 5082953 | 13917.1 |
| lexa family transcriptional regulator | E9D03_RS24635 | Not Available | Negative | 5083081 - 5083794 | 26083.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




