Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | E9D03_RS24480 | Not Available | Positive | 5065236 - 5065508 | 10352.5 |
| helix-turn-helix domain-containing protein | E9D03_RS24485 | Not Available | Negative | 5065549 - 5066262 | 26832.1 |
| hypothetical protein | E9D03_RS24490 | Not Available | Negative | 5066357 - 5066596 | 8804.6 |
| cpbp family intramembrane metalloprotease | E9D03_RS24495 | Not Available | Negative | 5066883 - 5067701 | 30881.4 |
| antitermination protein | E9D03_RS24500 | Not Available | Negative | 5067853 - 5068224 | 13924.2 |
| rusa family crossover junction endodeoxyribonuclease | E9D03_RS24505 | Not Available | Negative | 5068214 - 5068428 | 7700.26 |
| hypothetical protein | E9D03_RS24515 | Not Available | Negative | 5069749 - 5069949 | 7588.15 |
| hypothetical protein | E9D03_RS24520 | Not Available | Negative | 5070220 - 5070762 | 20774.9 |
| rhs repeat protein | E9D03_RS24525 | Not Available | Negative | 5070787 - 5071314 | 19655.3 |
| shiga toxin stx2a subunit b | E9D03_RS24530 | Not Available | Negative | 5071382 - 5071651 | 9874.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




