Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clp protease clpp | E9D03_RS24375 | Not Available | Negative | 5047647 - 5049520 | 67446.5 |
| phage tail protein | E9D03_RS24380 | Not Available | Positive | 5049573 - 5050316 | 28225.2 |
| tail assembly protein | E9D03_RS24385 | Not Available | Positive | 5050253 - 5050861 | 21427.0 |
| host specificity protein j | E9D03_RS24390 | Not Available | Positive | 5050922 - 5053082 | 79134.0 |
| type ii toxin-antitoxin system mrna endoribonuclease lsoa | E9D03_RS24395 | Not Available | Positive | 5053106 - 5054146 | 39576.1 |
| type ii toxin-antitoxin system antitoxin lsob | E9D03_RS24400 | Not Available | Positive | 5054143 - 5054523 | 14527.4 |
| nika protein | E9D03_RS24405 | Not Available | Negative | 5054758 - 5055081 | 12073.8 |
| rop family plasmid primer rna-binding protein | E9D03_RS24410 | Not Available | Positive | 5055353 - 5055547 | 7270.57 |
| hypothetical protein | E9D03_RS24420 | Not Available | Positive | 5055735 - 5056106 | 13684.4 |
| hypothetical protein | E9D03_RS24425 | Not Available | Positive | 5056389 - 5058005 | 58558.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




