Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein | E9D03_RS24325 | Not Available | Positive | 5042341 - 5042428 | 2865.59 |
| protein ren | E9D03_RS24330 | Not Available | Positive | 5042425 - 5042727 | 11131.6 |
| smr family multidrug efflux protein emre | E9D03_RS24335 | Not Available | Positive | 5042795 - 5043127 | 11931.0 |
| hypothetical protein | E9D03_RS24340 | Not Available | Positive | 5043192 - 5043314 | 4771.17 |
| recombinase family protein | E9D03_RS24345 | Not Available | Positive | 5043372 - 5044898 | 57554.2 |
| hypothetical protein | E9D03_RS24350 | Not Available | Positive | 5045400 - 5045855 | 17351.8 |
| phage tail protein | E9D03_RS24355 | Not Available | Negative | 5045935 - 5046320 | 14790.7 |
| phage tail protein | E9D03_RS24360 | Not Available | Negative | 5046333 - 5046956 | 23226.1 |
| dna breaking-rejoining protein | E9D03_RS24365 | Not Available | Negative | 5046959 - 5047240 | 10485.7 |
| duf2190 family protein | E9D03_RS24370 | Not Available | Negative | 5047233 - 5047559 | 10685.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




