Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | E9D03_RS24170 | Not Available | Positive | 5026392 - 5027270 | 31799.9 |
| hypothetical protein | E9D03_RS24175 | Not Available | Positive | 5027441 - 5027630 | 7704.73 |
| membrane-bound lytic murein transglycosylase emta | E9D03_RS24180 | Not Available | Negative | 5027774 - 5028385 | 22213.7 |
| muramoyltetrapeptide carboxypeptidase | E9D03_RS24185 | Not Available | Positive | 5028485 - 5029399 | 33603.5 |
| potassium/proton antiporter | E9D03_RS24190 | Not Available | Positive | 5029495 - 5031231 | 62209.1 |
| hypothetical protein | E9D03_RS24195 | Not Available | Positive | 5031402 - 5031659 | 9476.7 |
| enterotoxin | E9D03_RS24200 | Not Available | Positive | 5031653 - 5032402 | 29013.4 |
| type iii secretion system needle complex protein | E9D03_RS24205 | Not Available | Positive | 5032416 - 5032655 | 9038.44 |
| hypothetical protein | E9D03_RS24210 | Not Available | Positive | 5032675 - 5033007 | 12216.5 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | E9D03_RS24215 | Not Available | Positive | 5033004 - 5033738 | 27625.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




