Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9D03_RS23995 | Not Available | Positive | 5003219 - 5003446 | 8392.39 |
| hypothetical protein | E9D03_RS24000 | Not Available | Positive | 5003439 - 5003750 | 11980.7 |
| duf4014 domain-containing protein | E9D03_RS24005 | Not Available | Positive | 5003878 - 5004096 | 8706.76 |
| duf551 domain-containing protein | E9D03_RS24010 | Not Available | Positive | 5004098 - 5004655 | 20432.1 |
| type i toxin-antitoxin system hok family toxin | E9D03_RS24015 | Not Available | Positive | 5004889 - 5005101 | 7887.95 |
| ygiw/ydei family stress tolerance ob fold protein | E9D03_RS24020 | Not Available | Positive | 5005221 - 5005565 | 12395.7 |
| hypothetical protein | E9D03_RS24025 | Not Available | Positive | 5005687 - 5005959 | 10888.0 |
| duf968 domain-containing protein | E9D03_RS24030 | Not Available | Positive | 5005961 - 5006494 | 19987.1 |
| replication protein | E9D03_RS24035 | Not Available | Negative | 5006495 - 5006811 | 11675.2 |
| regulator | E9D03_RS24040 | Not Available | Negative | 5006900 - 5007439 | 20262.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




