Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 4972729 - 4972804 | Not Available |
| type i pantothenate kinase | E9D03_RS23830 | Not Available | Positive | 4973166 - 4974116 | 36361.8 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | E9D03_RS23835 | Not Available | Negative | 4974145 - 4975110 | 35331.1 |
| udp-n-acetylmuramate dehydrogenase | E9D03_RS23840 | Not Available | Negative | 4975107 - 4976135 | 37890.2 |
| hypothetical protein | E9D03_RS23855 | Not Available | Negative | 4978259 - 4978537 | 10761.3 |
| aaa family atpase | E9D03_RS23860 | Not Available | Negative | 4978608 - 4979984 | 50153.0 |
| replication protein | E9D03_RS23865 | Not Available | Negative | 4979981 - 4980802 | 30790.0 |
| hypothetical protein | E9D03_RS23870 | Not Available | Negative | 4980983 - 4981279 | 11126.4 |
| helix-turn-helix transcriptional regulator | E9D03_RS23875 | Not Available | Negative | 4981421 - 4981636 | 7771.41 |
| lexa family transcriptional regulator | E9D03_RS23880 | Not Available | Positive | 4981712 - 4982407 | 25633.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




