Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein | E9D03_RS23565 | Not Available | Positive | 4932840 - 4933022 | 6167.86 |
| ferritin-like domain-containing protein | E9D03_RS23570 | Not Available | Positive | 4933101 - 4933601 | 18473.8 |
| ferritin-like domain-containing protein | E9D03_RS23575 | Not Available | Positive | 4933638 - 4934144 | 19064.6 |
| manganese catalase family protein | E9D03_RS23580 | Not Available | Positive | 4934163 - 4935053 | 32169.9 |
| tail fiber assembly protein | E9D03_RS23585 | Not Available | Negative | 4935173 - 4935754 | 21591.2 |
| hypothetical protein | E9D03_RS23590 | Not Available | Negative | 4935754 - 4938420 | 87192.3 |
| duf4224 domain-containing protein | E9D03_RS23595 | Not Available | Positive | 4938545 - 4938748 | 7631.19 |
| tyrosine-type recombinase/integrase | E9D03_RS23600 | Not Available | Positive | 4938748 - 4939770 | 39146.9 |
| Trna-ser | Not Available | Not Available | Positive | 4939823 - 4939912 | Not Available |
| dgsa anti-repressor mtfa | E9D03_RS23610 | Not Available | Positive | 4940006 - 4940803 | 30280.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




