Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9D03_RS23510 | Not Available | Positive | 4922956 - 4923213 | 9445.39 |
| hypothetical protein | E9D03_RS23515 | Not Available | Positive | 4923283 - 4923561 | 11378.3 |
| duf968 domain-containing protein | E9D03_RS23520 | Not Available | Positive | 4923563 - 4924140 | 21482.0 |
| is66 family insertion sequence hypothetical protein | E9D03_RS23525 | Not Available | Positive | 4924179 - 4924541 | 13236.8 |
| hypothetical protein | E9D03_RS23535 | Not Available | Negative | 4924841 - 4925023 | 6986.38 |
| gtpase family protein | E9D03_RS23540 | Not Available | Positive | 4925352 - 4926224 | 32499.8 |
| autotransporter adhesin ag43 | E9D03_RS23545 | Not Available | Positive | 4926596 - 4929445 | 97821.0 |
| dgtpase | E9D03_RS23550 | Not Available | Positive | 4929556 - 4931387 | 68334.2 |
| tail fiber assembly protein | E9D03_RS23555 | Not Available | Negative | 4931388 - 4931617 | 8988.49 |
| class i sam-dependent methyltransferase | E9D03_RS23560 | Not Available | Positive | 4931674 - 4932342 | 24518.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




