Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-dipeptidase dcp | E9D03_RS23360 | Not Available | Positive | 4898462 - 4900507 | 77454.7 |
| 2-oxo-tetronate isomerase | E9D03_RS23365 | Not Available | Negative | 4900552 - 4901070 | 18292.8 |
| ydei family stress tolerance ob fold protein | E9D03_RS23370 | Not Available | Positive | 4901346 - 4901565 | 7811.33 |
| hypothetical protein | E9D03_RS23425 | Not Available | Positive | 4909486 - 4909750 | 10240.4 |
| alpa family transcriptional regulator | E9D03_RS23430 | Not Available | Positive | 4909850 - 4910056 | 7980.61 |
| site-specific integrase | E9D03_RS23435 | Not Available | Positive | 4910379 - 4911584 | 46801.7 |
| phage integrase family protein | E9D03_RS23440 | Not Available | Positive | 4911586 - 4912899 | 51431.6 |
| dna-binding protein | E9D03_RS23445 | Not Available | Positive | 4912896 - 4914527 | 62825.1 |
| hypothetical protein | E9D03_RS23450 | Not Available | Positive | 4914528 - 4914926 | 15300.7 |
| hypothetical protein | E9D03_RS23455 | Not Available | Positive | 4915024 - 4915437 | 16373.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




