Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9D03_RS23135 | Not Available | Positive | 4866944 - 4867546 | 23103.2 |
| trar/dksa family transcriptional regulator | E9D03_RS23140 | Not Available | Negative | 4867757 - 4867978 | 8204.77 |
| hypothetical protein | E9D03_RS23145 | Not Available | Negative | 4868077 - 4868358 | 10398.7 |
| duf1382 family protein | E9D03_RS23150 | Not Available | Negative | 4868369 - 4868560 | 7035.5 |
| duf1317 family protein | E9D03_RS23155 | Not Available | Negative | 4868533 - 4868708 | 6501.98 |
| arac family transcriptional regulator | E9D03_RS23160 | Not Available | Positive | 4869143 - 4869886 | 28185.8 |
| tyrosine-type recombinase/integrase | E9D03_RS23170 | Not Available | Positive | 4870849 - 4872030 | 45044.4 |
| restriction endonuclease | E9D03_RS23175 | Not Available | Positive | 4872034 - 4872450 | 15972.7 |
| hypothetical protein | E9D03_RS23180 | Not Available | Positive | 4872423 - 4873040 | 24015.6 |
| hypothetical protein | E9D03_RS23185 | Not Available | Positive | 4873040 - 4873498 | 17649.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




