Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase katp | E9D03_RS22980 | Not Available | Positive | 4836792 - 4839002 | 81798.5 |
| cytochrome b562 family protein | E9D03_RS22985 | Not Available | Positive | 4839046 - 4839435 | 14582.7 |
| hypothetical protein | E9D03_RS23045 | Not Available | Negative | 4850375 - 4850562 | 7674.12 |
| hypothetical protein | E9D03_RS23050 | Not Available | Negative | 4850648 - 4850917 | 10152.2 |
| replication protein p | E9D03_RS23055 | Not Available | Negative | 4850918 - 4853824 | 109180.0 |
| helix-turn-helix domain-containing protein | E9D03_RS23060 | Not Available | Negative | 4853935 - 4854666 | 27720.9 |
| hypothetical protein | E9D03_RS23065 | Not Available | Negative | 4854829 - 4855128 | 11251.5 |
| helix-turn-helix domain-containing protein | E9D03_RS23070 | Not Available | Negative | 4855267 - 4855494 | 8281.09 |
| helix-turn-helix transcriptional regulator | E9D03_RS23075 | Not Available | Positive | 4855573 - 4856280 | 26447.6 |
| duf3024 domain-containing protein | E9D03_RS23080 | Not Available | Positive | 4856341 - 4856682 | 13473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




