Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | E9D03_RS22915 | Not Available | Positive | 4830571 - 4831032 | 17872.7 |
| hemolysin expression modulator hha | E9D03_RS22920 | Not Available | Positive | 4831078 - 4831287 | 8311.92 |
| hypothetical protein | E9D03_RS22925 | Not Available | Positive | 4831325 - 4831663 | 12673.7 |
| replication regulatory protein repa | E9D03_RS22930 | Not Available | Positive | 4831903 - 4832157 | 9406.44 |
| repa leader peptide tap | E9D03_RS22935 | Not Available | Positive | 4832393 - 4832467 | 2715.43 |
| incfii family plasmid replication initiator repa | E9D03_RS22940 | Not Available | Positive | 4832460 - 4833317 | 32717.6 |
| ribbon-helix-helix protein, copg family | E9D03_RS22945 | Not Available | Positive | 4834229 - 4834513 | 10475.5 |
| type ii toxin-antitoxin system rele/pare family toxin | E9D03_RS22950 | Not Available | Positive | 4834513 - 4834788 | 10736.0 |
| hypothetical protein | E9D03_RS22955 | Not Available | Positive | 4834883 - 4835089 | 8001.41 |
| hypothetical protein | E9D03_RS22975 | Not Available | Negative | 4836430 - 4836615 | 6876.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




