Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport protein csgf | E9D03_RS22810 | Not Available | Positive | 4816328 - 4816744 | 15056.7 |
| curli production assembly/transport protein csgg | E9D03_RS22815 | Not Available | Positive | 4816771 - 4817604 | 30559.0 |
| duf1097 domain-containing protein | E9D03_RS22820 | Not Available | Negative | 4817668 - 4818159 | 17081.5 |
| molecular chaperone | E9D03_RS22825 | Not Available | Negative | 4818261 - 4818815 | 20783.4 |
| phosphatase | E9D03_RS22830 | Not Available | Negative | 4818839 - 4819576 | 26833.9 |
| glyoxylate/hydroxypyruvate reductase ghra | E9D03_RS22835 | Not Available | Negative | 4819631 - 4820569 | 35361.4 |
| Trna-ser | Not Available | Not Available | Positive | 4820803 - 4820890 | Not Available |
| duf4942 domain-containing protein | E9D03_RS22845 | Not Available | Negative | 4821040 - 4821882 | 32552.1 |
| duf957 domain-containing protein | E9D03_RS22850 | Not Available | Negative | 4821967 - 4822164 | 7379.73 |
| hypothetical protein | E9D03_RS22855 | Not Available | Negative | 4822176 - 4822667 | 18214.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




