Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | E9D03_RS01325 | Not Available | Negative | 295590 - 296441 | 30424.7 |
| 30s ribosomal protein s2 | E9D03_RS01330 | Not Available | Negative | 296699 - 297424 | 26745.2 |
| type i methionyl aminopeptidase | E9D03_RS01335 | Not Available | Positive | 297792 - 298586 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | E9D03_RS01340 | Not Available | Positive | 298648 - 301320 | 102428.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | E9D03_RS01345 | Not Available | Positive | 301351 - 302175 | 29879.8 |
| duf3461 family protein | E9D03_RS01350 | Not Available | Positive | 302490 - 302876 | 15097.0 |
| cdar family transcriptional regulator | E9D03_RS01355 | Not Available | Negative | 302965 - 304122 | 43688.1 |
| serine endoprotease degp | E9D03_RS01360 | Not Available | Negative | 304277 - 305701 | 49357.3 |
| dgtpase | E9D03_RS01365 | Not Available | Negative | 305831 - 307348 | 59326.1 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | E9D03_RS01370 | Not Available | Positive | 307432 - 308130 | 24355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




