Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxic metabolite efflux mate transporter yeeo | E9D03_RS22385 | Not Available | Negative | 4740827 - 4742470 | 60041.9 |
| Trna-asn | Not Available | Not Available | Positive | 4742475 - 4742550 | Not Available |
| hth-type transcriptional regulator cbl | E9D03_RS22395 | Not Available | Negative | 4742588 - 4743538 | 35921.2 |
| nitrogen assimilation transcriptional regulator | E9D03_RS22400 | Not Available | Negative | 4743640 - 4744557 | 32809.0 |
| Trna-asn | Not Available | Not Available | Positive | 4744883 - 4744958 | Not Available |
| l,d-transpeptidase | E9D03_RS22410 | Not Available | Negative | 4745014 - 4745949 | 34508.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | E9D03_RS22415 | Not Available | Negative | 4746011 - 4747090 | 36899.3 |
| adenosylcobinamide-gdp ribazoletransferase | E9D03_RS22420 | Not Available | Negative | 4747102 - 4747845 | 26397.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | E9D03_RS22425 | Not Available | Negative | 4747842 - 4748387 | 20165.2 |
| type vi secretion system membrane subunit tssm | E9D03_RS22430 | Not Available | Positive | 4748874 - 4752308 | 130916.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




