Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | E9D03_RS22185 | Not Available | Positive | 4698378 - 4699349 | 34929.8 |
| abc transporter permease | E9D03_RS22190 | Not Available | Positive | 4699346 - 4700302 | 33795.9 |
| nadph-dependent aldehyde reductase yahk | E9D03_RS22195 | Not Available | Positive | 4700389 - 4701438 | 37970.6 |
| hypothetical protein | E9D03_RS22200 | Not Available | Positive | 4701681 - 4702496 | 31657.3 |
| Trna-pseudo | Not Available | Not Available | Positive | 4702842 - 4702922 | Not Available |
| lyse family transporter | E9D03_RS22210 | Not Available | Negative | 4703174 - 4703845 | 24839.9 |
| duf1471 domain-containing protein | E9D03_RS22215 | Not Available | Positive | 4703992 - 4704267 | 9930.92 |
| propionate catabolism operon regulatory protein prpr | E9D03_RS22220 | Not Available | Negative | 4704365 - 4705951 | 58632.9 |
| methylisocitrate lyase | E9D03_RS22225 | Not Available | Positive | 4706190 - 4707080 | 32146.5 |
| 2-methylcitrate synthase | E9D03_RS22230 | Not Available | Positive | 4707236 - 4708405 | 43109.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




