Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | E9D03_RS21780 | Not Available | Positive | 4620142 - 4620525 | 14365.4 |
| duf1992 domain-containing protein | E9D03_RS21785 | Not Available | Positive | 4620632 - 4621000 | 13944.6 |
| zn(2+)-responsive transcriptional regulator | E9D03_RS21790 | Not Available | Positive | 4621011 - 4621436 | 16180.4 |
| alternative ribosome-rescue factor a | E9D03_RS21795 | Not Available | Positive | 4621492 - 4621710 | 8171.86 |
| large-conductance mechanosensitive channel protein mscl | E9D03_RS21800 | Not Available | Negative | 4621707 - 4622117 | 14957.7 |
| trk system potassium transporter trka | E9D03_RS21805 | Not Available | Negative | 4622247 - 4623623 | 50370.8 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | E9D03_RS21810 | Not Available | Negative | 4623645 - 4624934 | 48354.2 |
| methionyl-trna formyltransferase | E9D03_RS21815 | Not Available | Negative | 4624980 - 4625927 | 34142.4 |
| peptide deformylase | E9D03_RS21820 | Not Available | Negative | 4625942 - 4626451 | 19329.6 |
| dna-protecting protein dpra | E9D03_RS21825 | Not Available | Positive | 4626581 - 4627705 | 41008.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




