Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | E9D03_RS21525 | Not Available | Negative | 4587268 - 4587720 | 17523.1 |
| type ii toxin-antitoxin system mrna interferase toxin yafo | E9D03_RS21530 | Not Available | Negative | 4587730 - 4588128 | 15474.7 |
| type i toxin-antitoxin system antitoxin yafn | E9D03_RS21535 | Not Available | Negative | 4588131 - 4588424 | 11234.4 |
| dna polymerase iv | E9D03_RS21540 | Not Available | Negative | 4588476 - 4589531 | 39463.1 |
| putative lateral flagellar export/assembly protein lafu | E9D03_RS21545 | Not Available | Negative | 4589602 - 4590387 | 28939.9 |
| flagellar type iii secretion system protein flha | E9D03_RS21550 | Not Available | Positive | 4590332 - 4592071 | 63162.0 |
| c40 family peptidase | E9D03_RS21560 | Not Available | Negative | 4592889 - 4593662 | 29731.5 |
| type ii toxin-antitoxin system antitoxin dinj | E9D03_RS21565 | Not Available | Positive | 4593848 - 4594108 | 9378.27 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | E9D03_RS21570 | Not Available | Positive | 4594127 - 4594387 | 10027.3 |
| murein l,d-transpeptidase | E9D03_RS21575 | Not Available | Positive | 4594543 - 4595283 | 28022.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




