Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial chaperone ecpe | E9D03_RS21420 | Not Available | Negative | 4568401 - 4569111 | 26651.7 |
| fimbrial adhesin ecpd | E9D03_RS21425 | Not Available | Negative | 4569080 - 4570723 | 60010.1 |
| hypothetical protein | E9D03_RS21430 | Not Available | Negative | 4570713 - 4573238 | 91232.6 |
| fimbrial chaperone ecpb | E9D03_RS21435 | Not Available | Negative | 4573264 - 4573932 | 24514.4 |
| common pilus major fimbrillin subunit ecpa | E9D03_RS21440 | Not Available | Negative | 4573990 - 4574577 | 20112.5 |
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | E9D03_RS21445 | Not Available | Negative | 4574652 - 4575194 | 21231.8 |
| hypothetical protein | E9D03_RS21450 | Not Available | Positive | 4576019 - 4576210 | 7297.65 |
| 50s ribosomal protein l36 | E9D03_RS21455 | Not Available | Negative | 4576280 - 4576420 | 5466.94 |
| type b 50s ribosomal protein l31 | E9D03_RS21460 | Not Available | Negative | 4576420 - 4576683 | 9920.71 |
| antitermination protein | E9D03_RS21465 | Not Available | Positive | 4577133 - 4577378 | 9576.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




