Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | E9D03_RS21110 | Not Available | Negative | 4508246 - 4509283 | 37397.1 |
| aminopeptidase | E9D03_RS21115 | Not Available | Negative | 4509283 - 4510368 | 39771.5 |
| fructose-like permease iic component | E9D03_RS21120 | Not Available | Negative | 4510383 - 4511630 | 43955.0 |
| fructose-like phosphotransferase enzyme iib component 1 | E9D03_RS21125 | Not Available | Negative | 4511652 - 4511978 | 11736.0 |
| glucokinase | E9D03_RS21130 | Not Available | Negative | 4512197 - 4513162 | 34725.1 |
| ion channel protein | E9D03_RS21135 | Not Available | Positive | 4513366 - 4514622 | 43576.4 |
| duf2502 domain-containing protein | E9D03_RS21140 | Not Available | Positive | 4514737 - 4515063 | 13263.4 |
| mn(2+) uptake nramp transporter mnth | E9D03_RS21145 | Not Available | Negative | 4515203 - 4516441 | 44196.5 |
| nucleoside permease nupc | E9D03_RS21150 | Not Available | Positive | 4516777 - 4517979 | 43460.5 |
| sensor domain-containing phosphodiesterase | E9D03_RS21155 | Not Available | Negative | 4518029 - 4520218 | 83575.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




