Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein metn | E9D03_RS01175 | Not Available | Positive | 264809 - 265840 | 37804.7 |
| methionine abc transporter permease meti | E9D03_RS01180 | Not Available | Positive | 265833 - 266486 | 23243.6 |
| methionine abc transporter substrate-binding lipoprotein metq | E9D03_RS01185 | Not Available | Positive | 266526 - 267341 | 29418.2 |
| rcs stress response system protein rcsf | E9D03_RS01190 | Not Available | Positive | 267459 - 267863 | 14178.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | E9D03_RS01195 | Not Available | Positive | 267860 - 268567 | 26437.9 |
| proline--trna ligase | E9D03_RS01200 | Not Available | Positive | 268678 - 270396 | 63655.3 |
| yaef family permuted papain-like enzyme | E9D03_RS01205 | Not Available | Positive | 270449 - 271273 | 30072.2 |
| envelope stress response activation lipoprotein nlpe | E9D03_RS01210 | Not Available | Negative | 271473 - 272183 | 25855.7 |
| aminoacyl-trna hydrolase | E9D03_RS01215 | Not Available | Negative | 272197 - 272607 | 15137.3 |
| yaeq family protein | E9D03_RS01220 | Not Available | Negative | 272604 - 273149 | 20849.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




