Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | E9D03_RS20645 | Not Available | Positive | 4411062 - 4411409 | 12777.4 |
| type ii secretion system minor pseudopilin gspj | E9D03_RS20650 | Not Available | Positive | 4411406 - 4412005 | 22705.6 |
| type ii secretion system minor pseudopilin gspk | E9D03_RS20655 | Not Available | Positive | 4412002 - 4412979 | 36853.8 |
| type ii secretion system protein gspl | E9D03_RS20660 | Not Available | Positive | 4413018 - 4414190 | 44378.3 |
| type ii secretion system protein m | E9D03_RS20665 | Not Available | Positive | 4414177 - 4414689 | 19598.9 |
| prepilin peptidase | E9D03_RS20670 | Not Available | Positive | 4414747 - 4415580 | 30458.2 |
| gsps family t2ss pilot lipoprotein variant epto | E9D03_RS20675 | Not Available | Positive | 4415672 - 4416073 | 15052.4 |
| enterohemolysin-activating lysine-acyltransferase ehxc | E9D03_RS20685 | Not Available | Positive | 4417964 - 4418479 | 20137.3 |
| enterohemolysin ehxa | E9D03_RS20690 | Not Available | Positive | 4418481 - 4421477 | 107054.0 |
| enterohemolysin t1ss abc transporter permease/atpase ehxb | E9D03_RS20695 | Not Available | Positive | 4421527 - 4423647 | 79819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




