Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | E9D03_RS20490 | Not Available | Negative | 4384148 - 4384306 | 6108.69 |
| plasmid sos inhibition protein a | E9D03_RS20495 | Not Available | Negative | 4384538 - 4385299 | 29283.8 |
| conjugation system sos inhibitor psib | E9D03_RS20500 | Not Available | Negative | 4385296 - 4385730 | 15840.8 |
| parb/repb/spo0j family partition protein | E9D03_RS20505 | Not Available | Negative | 4385785 - 4387743 | 71661.1 |
| duf905 domain-containing protein | E9D03_RS20510 | Not Available | Negative | 4387809 - 4388042 | 9088.78 |
| single-stranded dna-binding protein | E9D03_RS20515 | Not Available | Negative | 4388099 - 4388551 | 16740.8 |
| hypothetical protein | E9D03_RS20520 | Not Available | Positive | 4388853 - 4389302 | 16021.6 |
| class i sam-dependent methyltransferase | E9D03_RS20525 | Not Available | Negative | 4389388 - 4389951 | 21091.7 |
| duf3560 domain-containing protein | E9D03_RS20530 | Not Available | Negative | 4389998 - 4391359 | 51724.1 |
| hypothetical protein | E9D03_RS20535 | Not Available | Negative | 4391411 - 4391641 | 8582.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




