Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella biosynthesis chaperone flij | E9D03_RS20205 | Not Available | Negative | 4330623 - 4331066 | 17325.6 |
| flagellum-specific atp synthase flii | E9D03_RS20210 | Not Available | Negative | 4331085 - 4332458 | 49318.6 |
| flagellar assembly protein flih | E9D03_RS20215 | Not Available | Negative | 4332520 - 4333206 | 25059.6 |
| flagellar motor switch protein flig | E9D03_RS20220 | Not Available | Negative | 4333199 - 4334194 | 36778.2 |
| flagellar basal body m-ring protein flif | E9D03_RS20225 | Not Available | Negative | 4334187 - 4335845 | 60712.8 |
| flagellar hook-basal body complex protein flie | E9D03_RS20230 | Not Available | Positive | 4336060 - 4336374 | 11127.5 |
| t3ss effector leucine-rich repeat protein espr4 | E9D03_RS20235 | Not Available | Positive | 4336723 - 4337862 | 43268.0 |
| gnat family n-acetyltransferase | E9D03_RS20240 | Not Available | Negative | 4338000 - 4338152 | 5706.6 |
| mfs transporter | E9D03_RS20395 | Not Available | Negative | 4355480 - 4356727 | 46859.2 |
| aminoimidazole riboside kinase | E9D03_RS20400 | Not Available | Negative | 4356799 - 4357713 | 33109.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




